CDS

Accession Number TCMCG016C20978
gbkey CDS
Protein Id OMO63867.1
Location join(69651..69820,69920..70211,70292..70428,70797..70895,71055..71175,71807..72079,72170..72250,72321..72404,72680..72766,72894..72949,73036..73233,73399..73624,74432..74520,74906..75059,75351..75473,75569..75637)
Organism Corchorus capsularis
locus_tag CCACVL1_22227

Protein

Length 752aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01012865.1
Definition Spc97/Spc98 [Corchorus capsularis]
Locus_tag CCACVL1_22227

EGGNOG-MAPPER Annotation

COG_category Z
Description Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K16571        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000923        [VIEW IN EMBL-EBI]
GO:0000930        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007020        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009624        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030865        [VIEW IN EMBL-EBI]
GO:0031109        [VIEW IN EMBL-EBI]
GO:0031122        [VIEW IN EMBL-EBI]
GO:0032153        [VIEW IN EMBL-EBI]
GO:0032155        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043015        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043622        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044450        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046785        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051225        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051415        [VIEW IN EMBL-EBI]
GO:0051418        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090307        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTGCACGAGCTTTTACTGGCACTTGTTGGATACACCGGAGATCTCATAATCGACGAAAGAGAACACCAAAAATCTCTCGGTGTTAACTTATCCCCCGATGCACCCATCTCCGACCAACGCTCCTTCAAGCTTGCTCCCGATATCTCCTTCATCGACCCCGCCGAAAGGGATCTTATCGAGAGGCTAATTACATTAGGGTTTTACTACCGAGAGCTCGATCGTTTTGCCGCGAAATCCCGGAATTTAAGCTGGATAAGGTCCGCTGATGTCTCTCCTTCGGACAGAGCGTCTGAGTTATCCAAACCTAAGGCCCAGAAACCAAGCGTTTATCGCAGAGCCATTGCTAATGGCCTGGTGGAGATACTCTCCTTATATAGGTCTGCTGTTCTTCAAATTGAGCAGAAATTGTTGTCCGAAACCATGCCCATTTTGGCAACTGTTACTCAGGGCCTCAATAAGTTCTTTGTTCTTTTGCCACCTCTGTACGATCTTATATTAGAGATTGAGCGTGATGATATACGTGGAGGACAGCTTCTTAACCTTTTACAAAAACGCTGCCATTGTGGGGTGCCTGAATTGCAGGCCTGCATTCAAAGGCTGCTTTGGCACGGTCATCAAGTGTTATATAATCAACTTGCATCATGGATGGTTTATGGAATTCTTCAAGACCAGCATGGTGAATTTTTCATTAGAAGGCAGGAAGATAGAGATGTGGAGTATGGCTCATCTATCCCAGATATGTCTGAAAAGTTGGCACGCTTGTCAACTGACGATTCATCTTTAAAGGACTGGCACTTGGGCTTTCATATTTTCCTGGATATGCTCCCTGAATATATCCACATGCGTGTTGCAGAGTCCATTCTTTTTGCTGGTAAAGCCATCAGGGTTCTTAGGAACCCAAGCCCTGCCTTTCAGTTTCAAGATGCCCTAGGTAATCAACGAAAAACAGAAGGCTTCCAAAAGGTTCAACGATTAGCTGGGCATATTCCCCTCCCAAAGGAGCCTCTTCTTAATATAAAGGTGATTGGAGAAGAATTGCTTCCACAATCTGAGGCTGATAAGATTGAAACCATGCTACAGGACCTAAAGGAATCATCAGAGTTTCACAAAAGATCATTTGAATGCTCAGTTGACTCTATACGGGCTATCGCAGCTTGTCATCTTTGGCAGCTTGTGGTTGTACGTGCTGACTTGAATGGCCACCTGAAGGCTCTAAAAGACTATTTTCTTTTGGCAAAAGGGGACTTTTTCCAGTGCTTTCTTGAGGAGAGCCGGCAGTTAATGCGCCTACCGCCTCGCCAGTCAACTGCTGAAGCTGATCTTATGGTTCCATTTCAGCTGGCAGCCATAAAGACTATTGGTGAGGAAGACAAATACTTTTCCAAAGTATCTTTGCGGATGCCTTCATTTGGGATCACAATGAAATCCTCTCAAGTAGATTTACCAAAGACAAAAACGTATGCTGATGGAAGTTCAGGTGCTGTACTGTCAAGTACTTCTTCAGAGACATCACTTGATGGTTGGGATGGAATTGCTCTTGAGTATTCTGTTGATTGGCCCTTACAGCTGTTCTTTACCCAGGAGGTGCTTTCCAAGTATCGTAGAATTTTCCAGTACTTGCTGAGGCTCAAACGAACACAAATGGAGTTGGAGAAGTCCTGGGCATCTGTTATGCATCAGGATCACACAGATTTTGCCATACACCGAAATGACCGGATAAATTGCTCTATATCTCAGCCGCGGAGGCAGCGTTTTAGACCAATGTGGCGTGTTAGAGAGCACATGGCCTTTTTAATTAGAAATCTTCAATTTTACATCCAGGTTGATGTGATAGAGTCTCAGTGGAATGTTTTGCAATCTCATATTCAAGATTCACATGACTTCACTGAACTTGTGGGTTTCCATCAAGAGTATTTATCGGCTTTAATTTCTCAGTCTTTCCTGGACATTGGCTCTGTATCAAGGATATTGGACAGCATCATGACACTTTGCCTACAGTTCTGCTGGAATATTGAGAACCAAGAAAGCAGTCAAAATACATCTGAACTAGAACGTATAATTGAGGAATTTAACAAGAAATCAAACTCCTTATATACCATATTGCGTAGTAGCAGGCTTGCTGGTAGTCAGCGAGCTCCATTTCTGAGACGTTTCCTTTTGCGTATGAATTTTAATTCCTTCTTTGAGACAACGGCAAGGGGCGTGATGAATGTTGTGAGACCACGCCCATCAGTTCCTGTTTCTAACCAGCAATAG
Protein:  
MLHELLLALVGYTGDLIIDEREHQKSLGVNLSPDAPISDQRSFKLAPDISFIDPAERDLIERLITLGFYYRELDRFAAKSRNLSWIRSADVSPSDRASELSKPKAQKPSVYRRAIANGLVEILSLYRSAVLQIEQKLLSETMPILATVTQGLNKFFVLLPPLYDLILEIERDDIRGGQLLNLLQKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMVYGILQDQHGEFFIRRQEDRDVEYGSSIPDMSEKLARLSTDDSSLKDWHLGFHIFLDMLPEYIHMRVAESILFAGKAIRVLRNPSPAFQFQDALGNQRKTEGFQKVQRLAGHIPLPKEPLLNIKVIGEELLPQSEADKIETMLQDLKESSEFHKRSFECSVDSIRAIAACHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLAAIKTIGEEDKYFSKVSLRMPSFGITMKSSQVDLPKTKTYADGSSGAVLSSTSSETSLDGWDGIALEYSVDWPLQLFFTQEVLSKYRRIFQYLLRLKRTQMELEKSWASVMHQDHTDFAIHRNDRINCSISQPRRQRFRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQSHIQDSHDFTELVGFHQEYLSALISQSFLDIGSVSRILDSIMTLCLQFCWNIENQESSQNTSELERIIEEFNKKSNSLYTILRSSRLAGSQRAPFLRRFLLRMNFNSFFETTARGVMNVVRPRPSVPVSNQQ